Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912824.1_cds_XP_016462911.1_56084
CDS Infomation

[gene=LOC107785992] [db_xref=GeneID:107785992] [protein=spermidine-binding periplasmic protein SpuE-like] [protein_id=XP_016462911.1] [location=join(143631..143949,145070..145221,146511..146759,147664..147798,148303..148482,149772..149933,150508..150918)] [gbkey=CDS]
Sequence

ATGTCTTTGCTCTCACTTCCTCTCCCACTCCCAATTCCCCACAGCTCAAAACCCCATTAC
ACCACTCTTCGTCTACACAATTCTCGAACTTTCCACTTCCACAAAAACCTTAGGCTCTCC
GTTCGGGCCTCCGGCGTCCCCGTTCAACGGAACTCGGCGACATTGCCGGCGTCCGGCGAA
TTTCTCCGTCAAATTGCTGCTTCTACCGTTCTTTTTATCAGTTTGGGTTCGGCCCTTTTG
TCCTTTCCAGCTGTTGCTACTACTCACGTTCCTCCTCAAGTCCCTTCTCTAACTCAGCTT
CAGGACCAAGAATCTCAAGGCACTGAAGTTGGAAAATCGGAAAATATGGAAGATATTGAT
GATGAAGAGCTTCAAGCGGCATTTGAGAAATGGAAGTCTAAGACGTATGCTTTGACTGTC
CCTCTAAGAATTGTTTCTCTTAGTAACTCTTTTCCTCCTGTATGGCTCAAGGATTTCTTG
CGATCTCAAGGGAAGAGATTGAGATTACGTTCTGAGTTTCGTCAAAGCCTGCAAGACATC
TTTCATGAACTTTGTATGCCTAGTCGGAAAGGAAAAGTTAATCCTAAATCTGCTTTGGCA
GCTGATGTTGTCACTGTTGGTGATACCTGGCTCAGTTATGCCATTGAGAAGAGGTTAATC
GAGCCGATGCATGGTTTAGAAGATCAAGATTGGTTTGAAAAGTTAAGTGACAAATGGAAG
GTATATTTGCGCAGGAGCGATGAAGGGAAATTGGATTCTCGTGGTAGGATATGGGCAGCT
CCATATAGATGGGGAAGCATAGTGATAGCTTACAAGAAAAGCGAATTTCAAAAGCGTAAA
ATGGCTCCTATAGAGGACTGGGCTGATCTATGGCGACCTGAACTTGCTGGAAAAATTTCA
ATGGTTGATTCACCACGAGAGATCGTGGGTGCAGTCTTAAAGTATATGGGGGCATCATAC
AACACAACCGACATGTCTGAAGTCGTTGGTGGAAGAGAGGCTGTGCAGCAGAATCTTGCA
TCACTTGTTAAACAGGTCCGGCTATTTGATAGCGGCCACTATCTTAAAGCCTTCGGAGTT
GGAGATGTATGGGTAGCTGTTGGATGGAGCAATGATGTTATTCCTGCTGCAAAGCGGATG
TCAAATATTGCTGTAGTTGTTCCCAAATCTGGTGCAAGTCTGTGGGCTGATTGCTGGGCA
ATACCTGCTTCTTCGAGAATTGCAACTGATCAAATTGGAGGAAGAGTTAGAGGACCATCA
CCAGTAGTGCATCAGTGGATAGAATTTTGCCTGCAAGATGAAAGGTTCAAAGACGACGTT
GTTCCAGGTGCTTCACCTAACGCCCTTGAATCACCTGTTAAAGTCTCCGAAAAGCTTACT
AGGGGTAGACCAAAACTTGAGACAAACCTTATTGCTGGAGTCCCTCCATCTGATATCTTG
GCTAAATGTGAACTTTTAGAGCCATTGCCAGAAAATGCACTGTCCGATTATCAATGGCTC
ATAAATAGTGTACAAAAACCGAAGCTTTCTCTAGTGGAAAGCCTAAAGAGTCATATCTTG
TCATTAGCTCATAGCTTTCTTCCTAAAGGGCAGTCAAAGTTTGCCTGA

Peptide Sequence

PEP ID

XP_016462911.1
PEP Infomation

PREDICTED: spermidine-binding periplasmic protein SpuE-like [Nicotiana tabacum]
Sequence

MSLLSLPLPLPIPHSSKPHYTTLRLHNSRTFHFHKNLRLSVRASGVPVQRNSATLPASGE
FLRQIAASTVLFISLGSALLSFPAVATTHVPPQVPSLTQLQDQESQGTEVGKSENMEDID
DEELQAAFEKWKSKTYALTVPLRIVSLSNSFPPVWLKDFLRSQGKRLRLRSEFRQSLQDI
FHELCMPSRKGKVNPKSALAADVVTVGDTWLSYAIEKRLIEPMHGLEDQDWFEKLSDKWK
VYLRRSDEGKLDSRGRIWAAPYRWGSIVIAYKKSEFQKRKMAPIEDWADLWRPELAGKIS
MVDSPREIVGAVLKYMGASYNTTDMSEVVGGREAVQQNLASLVKQVRLFDSGHYLKAFGV
GDVWVAVGWSNDVIPAAKRMSNIAVVVPKSGASLWADCWAIPASSRIATDQIGGRVRGPS
PVVHQWIEFCLQDERFKDDVVPGASPNALESPVKVSEKLTRGRPKLETNLIAGVPPSDIL
AKCELLEPLPENALSDYQWLINSVQKPKLSLVESLKSHILSLAHSFLPKGQSKFA

Transcript Sequence

Gene sequence data has not been registered.